Butternut Squash Flatbread with Apples & Goat Cheese

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There’s something about the warm, nutty scent of roasting squash mingling with sweet apple slices that drew me into making this Butternut Squash Flatbread again and again. After three rounds of tweaking—roasting times, dough stretch techniques, cheese ratios—I’ve nailed a balance of tender crust, silky-sweet squash, and just-crisp apples.

Why You’ll Love Butternut Squash Flatbread

  • Comforting fall flavors in a handheld form
  • Contrast of creamy squash puree and crisp apple ribbons
  • Quick assembly with store-bought dough
  • Inspired by seasonal produce and rustic Italian flatbreads

A Little Background

Last October, I roasted my first butternut squash straight from the farmers market and mashed it into a rough puree. On that cool evening, my kitchen filled with fragrant steam and a gentle crackling as the crust bubbled. That micro-experiment led me to combine squash and apple on flatbread—an ode to harvest celebrations.

Key Ingredients for Butternut Squash Flatbread

  • Pizza Dough (1 lb): Provides a chewy base; use 00-style flour dough for a light crust.
  • Butternut Squash (2 cups cubed): Roasted until tender; swap with sweet potato in a pinch.
  • Apple (1 medium): Thinly sliced for a crisp bite; Granny Smith adds tartness.
  • Goat Cheese (2 oz): Crumbled for tangy creaminess; blue cheese can be bold alternative.
  • Fresh Sage (1 tbsp): Chopped to finish; rosemary works too but be sparing.
  • Olive Oil & Maple Syrup: Drizzle for gloss and sweet-savory balance.

How to Make Butternut Squash Flatbread

  1. Preheat the oven to 425°F and line a baking sheet. Toss cubed squash with 1 tbsp olive oil, salt, and pepper; roast 18–20 minutes until edges caramelize and a fork slides through. (Personal note: in my first test the squash was underdone at 15 minutes—aim for that golden skin.)
  2. Meanwhile, roll out pizza dough on a floured surface into a rough rectangle, about 12×8 inches. Transfer to a parchment-lined pan and brush edges lightly with olive oil for a glossy, golden crust.
  3. Spread the roasted squash in a thin layer, leaving a ½-inch border. Sprinkle mozzarella (½ cup), then arrange apple slices on top so they slightly overlap—this creates soft “petals” that crisp at the tips.
  4. Dot with goat cheese and chopped sage, then drizzle 1 tsp maple syrup. Slide into the oven and bake 12–15 minutes until cheese is bubbling and crust has golden edges. (My tip: rotate halfway for even browning.)

Pro Tips & Troubleshooting

  • Use room-temperature dough so it stretches easily, avoiding spring-back.
  • If crust turns soggy, pre-bake for 3 minutes before topping to seal moisture.
  • Swap goat cheese for ricotta dollops and a sprinkle of nutmeg for a cozy variation.
  • To double, divide dough into two pans; bake one while the other proofing warms to room temp.

Storage & Make-Ahead Guide

Let leftovers cool completely (food safety tip: refrigerate within 2 hours). Store in airtight container up to 2 days; reheat at 350°F for 8–10 minutes to refresh crisp. Freeze individual slices, wrapped tightly, for up to 1 month—thaw overnight in fridge and reheat.

Serving Suggestions

Slice into strips and serve with a drizzle of aged balsamic or alongside a bowl of arugula salad tossed in lemon vinaigrette. For brunch, top wedges with a fried egg and extra sage leaves for color.

Frequently Asked Questions

  • How do I prepare butternut squash for flatbread? Peel, seed, and cube the squash, toss with oil and seasonings, then roast at 425°F for about 20 minutes until fork-tender.
  • Can I use a different cheese? Absolutely—feta, ricotta, or shredded fontina all work; just mind moisture content to avoid a soggy crust.
  • What’s the best way to reheat flatbread? Warm in a 350°F oven for 8–10 minutes to crisp the edges and gently melt toppings.
  • How thin should I roll the dough? Aim for roughly ¼-inch thickness so the crust can support toppings but still crisp up.
  • Can I make the dough from scratch? Yes—use a basic pizza dough recipe with bread flour, water, yeast, salt, and a touch of olive oil; give it 1–2 hours to rise.
  • Is it safe to freeze leftover flatbread? Yes, cool completely, wrap slices tightly, and freeze up to 1 month; thaw in fridge before reheating.

Final Thoughts

After testing three rounds from prep to storage, this Butternut Squash Flatbread has become my go-to autumn treat. I love pairing it with a crisp cider and letting friends slice it straight from the pan. Give it a try, and tag me in your kitchen triumphs—I can’t wait to see how yours turns out!

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Butternut Squash Flatbread
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Butternut Squash Flatbread

This flatbread layers roasted butternut squash and crisp apple slices on a chewy crust, finished with goat cheese, sage, and a touch of maple syrup for a sweet-savory fall twist.
Course Lunch
Cuisine American
Keyword apple squash, Butternut Squash Flatbread, fall recipes, flatbread, harvest
Prep Time 10 minutes
Cook Time 35 minutes
Total Time 45 minutes
Servings 4 servings
Calories 280kcal
Author Abby Marlow

Ingredients

Squash Mixture

  • 2 cups butternut squash cubed
  • 1 tbsp olive oil
  • 0.25 tsp kosher salt
  • 0.25 tsp freshly ground black pepper

Flatbread Assembly

  • 1 pound pizza dough
  • 0.5 cup shredded mozzarella cheese
  • 1 medium apple thinly sliced
  • 2 oz goat cheese crumbled
  • 1 tbsp fresh sage chopped
  • 1 tsp maple syrup

Instructions

Squash Mixture

  • Preheat oven to 425°F. Toss squash with olive oil, salt, and pepper on a baking sheet. Roast 18–20 minutes until golden and tender.

Flatbread Assembly

  • Roll dough into a 12×8-inch rectangle on a floured surface. Transfer to a parchment-lined pan and brush edges with oil. Spread roasted squash, sprinkle mozzarella, layer apple slices, dot with goat cheese and sage, and drizzle maple syrup. Bake 12–15 minutes until crust is golden and toppings bubble.

Notes

I discovered that slicing the apple as thin as possible prevents the crust from becoming soggy.
Rotating the baking sheet halfway through roasting ensures even caramelization of the squash.
Leftover slices stored in the fridge reheat best on a wire rack to retain crispness.

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